• Workstations: Many group members have a dedicated GPU workstation for their development work. We are based in room 234/234a in the Joseph Black Building, King’s buildings campus.
• section6: The lab in-house GPU cluster (http://section6.chem.ed.ac.uk/ganglia/ only accessible from within the University subnet) hosts a mix of ca. 30 Tesla/GTX cards, and ca. 300 Intel Xeon/AMD Opteron processors. The cluster is located in the JCMB server room. Used to prototype simulations, perform trajectory analyses, and for GPU computing.
• Eddie: The university of Edinburgh HPC cluster, (https://www.wiki.ed.ac.uk/pages/viewpage.action?spaceKey=ResearchServices&title=Eddie), hosts ca. 4000 cores and is used by group members for mid-size simulations.
• ARCHER: Large scale molecular simulations are typically carried out on the UK’s national HPC (http://www.archer.ac.uk/), the system hosts ca. 118,000 cores. 

• See the lab github page for a snapshot of the various ongoing software projects.
• We are co-developers of the Sire molecular simulation framework, which includes SOMD, an interface between the Sire and OpenMM simulation libraries we developed to perform alchemical free energy calculations. SOMD is also avaible via the graphical user interface Flare commercialise by Cresset.   
• We are co-developers of the BioSimSpace interoperable framework for molecular simulations. 
• We also implement code in a number of other open-source software projects, for instance PLUMED
• Group members use a variety of molecular simulation (e.g. Gromacs, AMBER suite and analysis (e.g. MDtraj, PyEmma  packages depending on the needs of their project.

• We have several collaborations with other UoE groups that have expertise in related techniques (Alison Hulme  – Organic synthesis, Malcolm Walkinshaw – crystallography and biophysics, Paul Barlow – protein biochemistry, Dusan Uhrin – NMR, Dave Clarke – Mass spectrometry). We also collaborate with experimentalists elsewhere in the UK and beyond.
• Protein expression and purification work is done in the Biological lab of the School of Chemistry, or at the Edinburgh Protein Production Facility in the School of Biological Sciences. EPPF also provides access to well-maintained instruments for biophysical characterization (AutoITC200, BIAcore T200, SEC-MALS, DLS, CD, fluorescence spectrometers). The Edinburgh Biomolecular NMR unit maintains a range of high-field spectrometers (800 and 600-MHz Bruker Avance models).
• Organic syntheses are carried out in Alison’s Hulme wet lab at the School of Chemistry.

Julien is member of the management committee of the CCP-BioSim  and HEC-BioSim academic networks. Group members attend or deliver training workshops, and use or contribute software for the associated academic communities.